About 2 weeks ago, a large percentage of our lab computers stopped checking in with the JSS (they would perform login/logout hooks, but no checkin). After working with Nathan in Jamf, he quickly helped me figure out that if a computer updated SEP to 14.2.0 (we initially installed 14.0.1) it would then have Firewall functionality (https://support.symantec.com/en_US/article.TECH250508.html) and it would be turned on. As soon as I turned it off, the computers immediately were able to check in.
The issue now is finding out how to script turning off the firewall. I just started looking into this, but I figured I'd reach out in case anyone else ran into this same issue and had any experience disabling features in SEP. If nothing else, maybe someone else is experiencing this same issue and this might help them out.
Thanks!