Just testing up setting up the new MacBooks with TouchID and discovered that when the TouchID is disabled the Sign in with your Apple ID setup assistant will run even if you supressed it in the com.apple.setupassistant.plist for your User Template.
To fix this you have to add to the com.apple.setupassistant.plist the additional key:
<key>DidSeeApplePaySetup</key>
<key>true/>
Just and FYI to others as I spent 2 days poking around trying to disable the setup assistant till I stumbled onto the fix.
Ed
